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Scientific paper - Original scientific paper
The estimation of linkage disequilibrium decay in Croatian Holstein cattle: potential for genomic selection
In: Zbornik radova 57. hrvatskog i 17. međunarodnog simpozija agronoma. / Majić, Ivana; Antunović, Zvonko (Ed.). Osijek: Fakultet agrobiotehničkih znanosti Sveučilišta Josipa Jurja Strossmayera, 2022. pp. 521-525. urn:nbn:hr:204:965296
Špehar, Marija; Ivkić, Zdenko; Solić, Dragan; Kasap, Ante

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Špehar, M., Ivkić, Z., Solić, D. & Kasap, A. (2022). The estimation of linkage disequilibrium decay in Croatian Holstein cattle: potential for genomic selection. In I. Majić, (Ed.), Z. Antunović, (Ed.), Zbornik radova 57. hrvatskog i 17. međunarodnog simpozija agronoma (pp. 521-525). Osijek: Fakultet agrobiotehničkih znanosti Sveučilišta Josipa Jurja Strossmayera. Retrieved from https://urn.nsk.hr/urn:nbn:hr:204:965296

Špehar, Marija, et al. "The estimation of linkage disequilibrium decay in Croatian Holstein cattle: potential for genomic selection." Zbornik radova 57. hrvatskog i 17. međunarodnog simpozija agronoma, edited by Ivana Majić, edited by Zvonko Antunović, Fakultet agrobiotehničkih znanosti Sveučilišta Josipa Jurja Strossmayera, 2022, pp. 521-525. https://urn.nsk.hr/urn:nbn:hr:204:965296

Špehar, Marija, Zdenko Ivkić, Dragan Solić and Ante Kasap. "The estimation of linkage disequilibrium decay in Croatian Holstein cattle: potential for genomic selection." In Zbornik radova 57. hrvatskog i 17. međunarodnog simpozija agronoma, 521-525. Osijek: Fakultet agrobiotehničkih znanosti Sveučilišta Josipa Jurja Strossmayera, 2022. Accessed 2025 January 10. https://urn.nsk.hr/urn:nbn:hr:204:965296

Špehar, M., et al. (2022) 'The estimation of linkage disequilibrium decay in Croatian Holstein cattle: potential for genomic selection', in Majić, I. (ed.), Antunović, Z. (ed.), Zbornik radova 57. hrvatskog i 17. međunarodnog simpozija agronoma, Fakultet agrobiotehničkih znanosti Sveučilišta Josipa Jurja Strossmayera, Osijek, pp. 521-525. Available at: https://urn.nsk.hr/urn:nbn:hr:204:965296 (Accessed 10 January 2025)

Špehar M, Ivkić Z, Solić D, Kasap A. The estimation of linkage disequilibrium decay in Croatian Holstein cattle: potential for genomic selection. In: I. Majić, ed., Z. Antunović, ed. Zbornik radova 57. hrvatskog i 17. međunarodnog simpozija agronoma. Osijek: Fakultet agrobiotehničkih znanosti Sveučilišta Josipa Jurja Strossmayera; 2022. Pp. 521-525. [cited 2025 January 10] Available at: https://urn.nsk.hr/urn:nbn:hr:204:965296

M. Špehar, Z. Ivkić, D. Solić and A. Kasap, "The estimation of linkage disequilibrium decay in Croatian Holstein cattle: potential for genomic selection", Zbornik radova 57. hrvatskog i 17. međunarodnog simpozija agronoma, I. Majić and Z. Antunović, Eds. Osijek: Fakultet agrobiotehničkih znanosti Sveučilišta Josipa Jurja Strossmayera, 2022. [Online] Available at: https://urn.nsk.hr/urn:nbn:hr:204:965296 [Accessed: 10 January 2025]

Metadata
Title (english)The estimation of linkage disequilibrium decay in Croatian Holstein cattle: potential for genomic selection
AuthorMarija Špehar
AuthorZdenko Ivkić
AuthorDragan Solić
AuthorAnte Kasap
EditorIvana Majić
EditorZvonko Antunović
Author's institutionUniversity of Zagreb
Faculty of Agriculture
Scientific / art field,
discipline and subdiscipline		BIOTECHNICAL SCIENCES
Agronomy
Abstract (english)
The objective of this study was to estimate linkage disequilibrium (LD) in 101 Croatian Holstein cows based on Illumina Bovine50K SNP chip. The average autosomal whole-genome LD (r^2) was 0.16 and for SNPs 100 Kbp apart 0.30. The average within-chromosomal LD ranged from 0.12 for BTA28 to 0.23 for BTA20, with no straightforward relation between chromosome length and r^2. The decay of LD showed an exponential trend with physical distance showing a very steep decay of LD within the first 150 Kbp. The results implicate a sufficient density of the 50K SNP chip for successful implementation of genomic selection (GS) and genome wide association studies (GWAS) in the population of Holstein cattle in Croatia.
Keywords (english)
Languageenglish
Publication typeScientific paper - Original scientific paper
Publication statusPublished
Peer reviewPeer review - international
Publication versionPublished version
Publication titleZbornik radova 57. hrvatskog i 17. međunarodnog simpozija agronoma
Numberingpp. 521-525
p-ISSN2459-5543
URN:NBNurn:nbn:hr:204:965296
Publication2022
ConferenceTitle: 57. hrvatski i 17. međunarodni simpozij agronoma
Location: Vodice, Croatia
Start date: 2022-06-19
End date: 2022-06-24
Assembly type: Lecture
Document URLhttps://sa.agr.hr/publication/23/57.+hrvatski+i+17.+me%C4%91unarodni+simpozij+agronoma+eZbornik+radova.Full+text
Type of resourceText
PublisherFakultet agrobiotehničkih znanosti Sveučilišta Josipa Jurja Strossmayera
Publishing placeOsijek
Access conditionsOpen access
Terms of useLicence In copyright icon
Created on2024-12-17 09:39:21